Search results for "Molecular Systematics"

showing 10 items of 12 documents

Evolutionary relationships, biogeography and morphological characters of Glinus (Molluginaceae), with special emphasis on the genus composition in Su…

2021

Glinus is a small genus of Molluginaceae with 8–10 species mostly distributed in the tropics of the World. Its composition and evolutionary relationships were poorly studied. A new molecular phylogeny constructed here using nuclear (ITS) and chloroplast (rbcL, trnK-matK) markers confirmed the monophyly of the genus. Based on ITS analysis, the following well-supported lineages are present within Glinus: the G. bainesii lineage is recovered as sister to the remainder of the genus followed by G. oppositifolius. Three other clades are: G. hirtus with G. orygioides; G. radiatus and G. lotoides; the latter is represented by a sample from North America, and G. zambesiacus as sister to G. setifloru…

0106 biological sciencesMolluginaceaeEvolutionary biologyPlant Scienceбиогеография01 natural sciencesMonophylyGenusPlantaeGlinusNomenclatureMolecular systematicsMonograph0303 health sciencesFloristics & DistributionSub-Saharan AfricaNomenclatureмолекулярная филогенияMollugoBiogeography1181 Ecology evolutionary biologyMolecular phylogeneticsTaxonomy (biology)Identification keyPHYLOGENYАфрикаBiologyCARYOPHYLLALES010603 evolutionary biologyMagnoliopsida03 medical and health sciencesGlinus lotoidesтаксономическая ревизияBotanyBiodiversity & Conservationmolecular phylogenyEcology Evolution Behavior and SystematicsTaxonomy030304 developmental biologyWorldBotanyMacarthuriaceae15. Life on land11831 Plant biologybiology.organism_classificationtaxonomic revisionTracheophytaGlinusQK1-989AfricaмоллюгиновыеPhytoKeys
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A large-scale, higher-level, molecular phylogenetic study of the insect order Lepidoptera (moths and butterflies).

2013

Background Higher-level relationships within the Lepidoptera, and particularly within the species-rich subclade Ditrysia, are generally not well understood, although recent studies have yielded progress. We present the most comprehensive molecular analysis of lepidopteran phylogeny to date, focusing on relationships among superfamilies. Methodology / Principal Findings 483 taxa spanning 115 of 124 families were sampled for 19 protein-coding nuclear genes, from which maximum likelihood tree estimates and bootstrap percentages were obtained using GARLI. Assessment of heuristic search effectiveness showed that better trees and higher bootstrap percentages probably remain to be discovered even …

0106 biological sciencesParaphylyNonsynonymous substitutionEvolutionary GeneticsAnimal EvolutionTineoideaZoologylcsh:MedicineBiologyAnimal PhylogeneticsMoths010603 evolutionary biology01 natural sciences03 medical and health sciencesDitrysiaMonophylyPhylogeneticsMolecular SystematicsEvolutionary ModelingAnimalsEvolutionary Systematicslcsh:ScienceBiologyPhylogeny030304 developmental biologyTaxonomy0303 health sciencesEvolutionary BiologyMultidisciplinaryPopulation Biologylcsh:RComputational Biologybiology.organism_classificationOrganismal EvolutionPhylogeneticsTaxonBombycoideaAnimal Taxonomylcsh:QZoologyButterfliesPopulation GeneticsResearch ArticlePLoS ONE
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Species identification of the psammophilous tenebrionid beetles Phaleria acuminata Juster, 1852 and Phaleria bimaculata (Linnaeus, 1767) from central…

2013

Dominating global arid environments, from desert to coastal dunes, most Tenebrionidae are highly specific in their habitat preferences and display limited dispersal potential, thus exhibiting a remarkable degree of regional genetic and morphological differentiation. The tenebrionid genus Phaleria is speciose and widely distributed, with P. acuminata and P. bimaculata having a wide Mediterranean distribution, with numerous morphological differentiations at population level, often described as different taxa of doubtful taxonomical significance. In order to investigate the variability of the central Mediterranean populations of P. bimaculata and P. acuminata and to compare the results obtaine…

Mediterranean climateMorphometricsEcologyPhaleria bimaculataSettore BIO/05 - ZoologiaSandy beaches Phaleria spp. Central Mediterranean Species delimitation Molecular systematics Geometric morphometricsBiologyPhaleriabiology.organism_classificationTaxonGenusMolecular phylogeneticsBiological dispersalAnimal Science and ZoologyDevelopmental Biology
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Nothodissotis (Melastomataceae), a new genus from Atlantic Central Africa, including the new species N. alenensis from Equatorial Guinea

2019

Based on morphological and phylogenetic evidence, a new genus of Melastomataceae (Melastomateae), Nothodissotis Veranso-Libalah & G.Kadereit, gen. nov., is described from Atlantic Central Africa. Nothodissotis is distinguished from other African Melastomateae genera by its calyx-lobes that are notched at apex and asymmetrical (vs. entire and symmetrical). Nothodissotis includes two species: the type species N.barteri (Hook.f.) Veranso-Libalah & G.Kadereit, comb. nov. (syn. Dissotisbarteri Hook.f.), and the new species N.alenensis Veranso-Libalah & O. Lachenaud, sp. nov., described and illustrated here. Both species are restricted to open vegetation on rock outcrops w…

MelastomataceaeBiodiversity & ConservationZoologyPlant ScienceBiologyphylogenyHypanthiumFloristics & DistributionMagnoliopsidaAtlantic Ocean IslandsGenuslcsh:BotanymorphologyIUCN Red ListVulnerable speciesPlantaeEcology Evolution Behavior and SystematicsMolecular systematicsTaxonomynew speciesAppendagevulnerable speciesCentral AfricaNomenclatureMyrtalesDissotisplant conservationbiology.organism_classificationlcsh:QK1-989TracheophytaType speciesMelastomataceaeAfricaEquatorial GuineaConservation statusNothodissotisResearch ArticleIdentification keyPhytoKeys
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Improving the conservation of Mediterranean Chondrichthyans : the ELASMOMED DNA barcode reference library

2017

Cartilaginous fish are particularly vulnerable to anthropogenic stressors and environmental change because of their K-selected reproductive strategy. Accurate data from scientific surveys and landings are essential to assess conservation status and to develop robust protection and management plans. Currently available data are often incomplete or incorrect as a result of inaccurate species identifications, due to a high level of morphological stasis, especially among closely related taxa. Moreover, several diagnostic characters clearly visible in adult specimens are less evident in juveniles. Here we present results generated by the ELASMOMED Consortium, a regional network aiming to sample …

0106 biological sciencesHeredityMolecular biologySpeciationBiodiversitySettore BIO/05 - Zoologialcsh:MedicineJuvenileEvolutionary biologyBarcodeBiochemistry01 natural sciencesDNA barcodinglaw.inventionlawDNA librarieslcsh:ScienceChondrichthyesSpecimens IdentificationData ManagementMolecular systematicsMultidisciplinaryGeographyMediterranean RegionEcologyCryptic speciationFishesBiodiversityMorphological stasiMitochondrial DNANucleic acidsGenetic MappingPhylogeographyBiogeographyDNA Barcode Reference LibraryDNA barcoding TaxonomicVertebratesDNA data banksResearch ArticleComputer and Information SciencesConservation of Natural ResourcesEvolutionary ProcessesEvolutionary systematicsBarcoding Chondrichthyans Conservation Mediterranean Sea mtDNACartilaginous fishConservationBiologyPhylogeographic structure010603 evolutionary biologyMolecular taxonomySpecies SpecificityEndemic SpeciesGeneticsMediterranean SeaAnimalsDNA Barcoding TaxonomicDNA barcoding14. Life underwaterEndemismTaxonomyPopulation Biology010604 marine biology & hydrobiologylcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesDNAResearch and analysis methodsPhylogeographyMolecular biology techniquesTaxonHaplotypesThreatened speciesEarth SciencesSharksConservation statuslcsh:QPopulation GeneticsMarine biodiversity conservationElasmobranchii
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Differences in gene flow in a twofold secondary contact zone of pond turtles in southern Italy (Testudines: Emydidae:Emys orbicularis galloitalica,E.…

2015

Using virtually range-wide sampling for three pond turtle taxa (Emys orbicularis galloitalica, E. o. hellenica, E. trinacris), we analyse gene flow across their southern Italian contact zone. Based on population genetic analyses of 15 highly polymorphic microsatellite loci and a mitochondrial marker, we show that the general genetic pattern matches well with the current taxon delimitation. Yet, single individuals with conflicting genetic identity suggest translocation of turtles by humans. In addition, we identify in south-western France and the vicinity of Rome populations being heavily impacted by introduced turtles. Cline analyses reveal that the major genetic break between E. o. galloit…

education.field_of_studybiologyEmys orbicularisEcologyPopulationSettore BIO/05 - ZoologiaZoologyCline (biology)EmydidaeSubspeciesbiology.organism_classificationGene flowIntergradationTaxonGeneticsAnimal Science and ZoologyeducationMolecular BiologyEcology Evolution Behavior and SystematicsEmys spp. Phylogeography Molecular systematics
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Integrative taxonomy of root aphid parasitoids from the genus Paralipsis (Hymenoptera, Braconidae, Aphidiinae) with description of new species

2019

Species from the genus Paralipsis are obligatory endoparasitoids of root aphids in the Palaearctic. It is known that these species are broadly distributed, parasitizing various aphid hosts and showing great biological and ecological diversity. On the other hand, this group of endoparasitoids is understudied and was thought to be represented by a single species in Europe, viz., Paralipsisenervis (Nees). However, recent description of two new species indicated the possibility of cryptic speciation and recognition of additional Paralipsis species in Europe. In this research, Paralipsis specimens collected during the last 60 years from eight European countries, as well as one sample from Morocc…

0106 biological sciences0301 basic medicineMitochondrial DNAInsectaArthropodaParalipsis rugosa sp. n.HymenopteraMolecular phylogeny010603 evolutionary biology01 natural sciencesFaunistics & DistributionBraconidaeParalipsis brachycaudi sp. n.03 medical and health sciencesParalipsisbrachycaudi sp. n.Paralipsis rugosa sp. nParalipsislcsh:ZoologyAnimalialcsh:QL1-991Aphidiinaemolecular phylogenyEcology Evolution Behavior and SystematicsMolecular systematicsTaxonomyAphidbiologyCryptic speciationParalipsisrugosa sp. n.biology.organism_classificationHymenopteraEuropeIchneumonoidea030104 developmental biologyTaxonEvolutionary biologyMolecular phylogeneticsAnimal Science and ZoologyTaxonomy (biology)BraconidaeAphidiinaeResearch Article
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Molecular evolution of the metazoan protein kinase C multigene family

1996

Protein kinases C (PKCs) comprise closely related Ser/Thr kinases, ubiquitously present in animal tissues ; they respond to second messengers, e.g., Ca2+ and/or diacylglycerol, to express their activities. Two PKCs have been sequenced from Geodia cydonium, a member of the lowest multicellular animals, the sponges (Porifera). One sponge G. cydonium PKC, GCPKC1, belongs to the ''novel'' (Ca2+-independent) PKC (nPKC) subfamily while the second one, GCPKC2, has the hall-marks of the ''conventional'' (Ca2+-dependent) PKC (cPKC) subfamily. The alignment of the Ser/Thr catalytic kinase domains, of the predicted aa sequences for these cDNAs with respective segments from previously reported sequence…

SubfamilyMolecular Sequence DataProtein Serine-Threonine KinasesHomology (biology)CatalysisEvolution MolecularGeneticsAnimalssponges ; Geodia cydonium ; serine/threonine kinases ; phylogeny ; molecular systematics ; molecular evolutionAmino Acid SequenceMolecular BiologyEcology Evolution Behavior and SystematicsProtein kinase CPhylogenyProtein Kinase CGeneticsProtein-Serine-Threonine KinasesbiologyBase SequenceSequence Homology Amino AcidKinaseCyclin-dependent kinase 2PKCSCell biologyPoriferaenzymes and coenzymes (carbohydrates)Protein kinase domainMultigene Familybiology.proteinbiological phenomena cell phenomena and immunity
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Molecular evidence for the presence of cryptic evolutionary lineages in the freshwater copepod genus Hemidiaptomus G.O. Sars, 1903 (Calanoida, Diapto…

2010

The pattern of morphological and mtDNA cytochrome b diversity of three calanoid copepod species belonging to the diaptomid genus Hemidiaptomus has been investigated with the aim of checking the reliability of the morphological characters currently used for species identification, and the possible presence of cryptic taxa. A sharply different molecular structuring has been observed in the studied species: while Hemidiaptomus amblyodon exhibits a remarkable constancy throughout the European range of its distribution area (maximum inter-populations cytochrome b divergence of 3%), observed distances between presumed conspecific lineages of Hemidiaptomus gurneyi (maximum divergence of 21.5%) and…

H. ingenCyt bHemidiaptomusbiologymtDNAEcologyCytochrome bCryptic evolutionary lineageSettore BIO/05 - ZoologiaZoologyAquatic ScienceMolecular systematics.biology.organism_classificationH. gurneyiHemidiaptomus amblyodonTaxonCalanoid copepodGenusMolecular phylogeneticsDiaptomidaeH. gurneyi canaanitaTaxonomy (biology)CalanoidaHydrobiologia
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Genetic and Ecotypic Differentiation in a Californian Plant Polyploid Complex (Grindelia, Asteraceae)

2014

Studies of ecotypic differentiation in the California Floristic Province have contributed greatly to plant evolutionary biology since the pioneering work of Clausen, Keck, and Hiesey. The extent of gene flow and genetic differentiation across interfertile ecotypes that span major habitats in the California Floristic Province is understudied, however, and is important for understanding the prospects for local adaptation to evolve or persist in the face of potential gene flow across populations in different ecological settings. We used microsatellite data to examine local differentiation in one of these lineages, the Pacific Coast polyploid complex of the plant genus Grindelia (Asteraceae). W…

Evolutionary GeneticsMarshPlant EvolutionSpeciationlcsh:MedicinePlant ScienceCaliforniaGene flowPloidyMolecular SystematicsNatural Selectionlcsh:ScienceFlowering Plantseducation.field_of_studyMultidisciplinarygeography.geographical_feature_categoryGeographyEcotypeEcologyfood and beveragesPolyploid complexPlantsBiological EvolutionHabitatResearch ArticleGene FlowEvolutionary ProcessesGrindeliaGenotypeGeneral Science & TechnologyPopulationParallel EvolutionBiologyPolyploidyGrindeliaEvolutionary Adaptationparasitic diseasesGeneticsEvolutionary SystematicseducationHybridizationTaxonomyLocal adaptationEcotypeEvolutionary BiologygeographyPopulation Biologylcsh:ROrganismsBiology and Life SciencesGeobotanyPlant Taxonomybiology.organism_classificationOrganismal EvolutionGenetic Locilcsh:QPopulation GeneticsMicrosatellite RepeatsPLoS ONE
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